|
| Protein |
|
| Gene Symbol | LRRC3B to neXtProt (NX_Q96PB8) |
| Description | Leucine-rich repeat-containing protein 3B |
| Chromosome | 3 |
| Location | 3p24.1 (26664297 ~ 26752267) to Ensembl |
|
|
Sequene Features : Isoforms 1, Variants 56, PTMs 2 to neXtProt Sequence Features
|
|
Gene
Ontologies |
| GO: Biological Process |
GO: Mulecular Function |
GO: Cellular Component |
|
.N/A |
.N/A |
.integral component of membrane |
|
|
| |
|
| Proteomic Evidences |
|
| |
|
| Release | | Protein Evidence | | Pr | | Ab | | Isoforms | | Variants | | PTMs |
|
| 2015-01-01 | | transcript level | | | | | | | 1 |
| 56 |
| 2 |
|
| 2014-09-19 | | transcript level | | | | | | | 1 |
| 33 |
| 2 |
|
| 2014-05-27 | | transcript level | | | | | | | 1 |
| 32 |
| 2 |
|
| 2014-02-25 | | transcript level | | | | | | | 1 |
| 31 |
| 2 |
|
| 2013-12-09 | | transcript level | | | | | | | 1 |
| 30 |
| 2 |
|
| 2013-11-01 | | transcript level | | | | | | | 1 |
| 26 |
| 2 |
|
| 2013-09-12 | | transcript level | | | | | | | 1 |
| 26 |
| 2 |
|
| 2013-08-17 | | transcript level | | | | | | | 1 |
| 26 |
| 2 |
|
| 2013-07-15 | | transcript level | | | | | | | 1 |
| 16 |
| 2 |
|
| 2013-06-11 | | transcript level | | | | | | | 1 |
| 16 |
| 2 |
|
| 2013-02-12 | | transcript level | | | | | | | 1 |
| 5 |
| 2 |
|
| 2012-12-20 | | transcript level | | | | | | | 1 |
| 5 |
| 2 |
|
| 2012-10-30 | | transcript level | | | | | | | 1 |
| 5 |
| 2 |
|
| 2012-10-07 | | transcript level | | | | | | | 1 |
| 5 |
| 2 |
|
| 2012-08-24 | | transcript level | | | | | | | 1 |
| 3 |
| 2 |
|
| 2012-07-28 | | transcript level | | | | | | | 1 |
| 3 |
| 2 |
|
| 2012-06-08 | | transcript level | | | | | | | 1 |
| 3 |
| 2 |
|
| 2012-05-07 | | transcript level | | | | | | | 1 |
| 2 |
| 2 |
|
| 2012-04-10 | | transcript level | | | | | | | 1 |
| 2 |
| 2 |
|
| 2012-01-13 | | transcript level | | | | | | | 1 |
| 0 |
| 2 |
|
| 2011-12-20 | | transcript level | | | | | | | 1 |
| 0 |
| 2 |
|
| 2011-11-11 | | transcript level | | | | | | | 1 |
| 0 |
| 2 |
|
| 2011-08-23 | | transcript level | | | | | | | 1 |
| 0 |
| 2 |
|
|
| |
|
| Protein Isoforms |
|
| |
| |
|
| : Uniquely mapped peptide | | : Gene-specific peptide | | : Shared peptide |
|
|
| |
|
| EST expression level of Protein Coding Gene (ref. NCBI UniGene EST) |
|
| |
|
| Body Sites | |
| Tissues | TPM* | |
|
| brain | 21 | |
| embryonic tissue | 4 | |
| eye | 4 | |
| lung | 2 | |
| testis | 9 | |
| vascular | 19 | |
|
| Health State | |
| Tissues | TPM* | |
|
| normal | 6 | |
| germ cell tumor | 11 | |
| glioma | 46 | |
| non-neoplasia | 31 | |
|
| Developmental Stage | |
| Tissues | TPM* | |
|
| adult | 3 | |
| embryoid body | 14 | |
| fetus | 12 | |
|
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags. |
| |
|
| Expression level of Protein (ref. Human Protein Atlas) |
|
| |
|
| RNA-Seq. | |
| Tissues | FPKM | |
|
| cerebral cortex | 11.1 | |
| ovary | 1.2 | |
| testis | 5.5 | |
| urinary bladder | 1.1 | |
|
| Cancer | |
| Tumor | Number of patients and Staining levels | |
| breast cancer | |
| carcinoid | |
| cervical cancer | |
| colorectal cancer | |
| endometrial cancer | |
| glioma | |
| head and neck cancer | |
| liver cancer | |
| lung cancer | |
| lymphoma | |
| melanoma | |
| ovarian cancer | |
| pancreatic cancer | |
| prostate cancer | |
| renal cancer | |
| skin cancer | |
| stomach cancer | |
| testis cancer | |
| thyroid cancer | |
| urothelial cancer | |
|
| RNA-seq colour codes |
|
|
Highly expressed RNAs (FPKM >50) | |
|
Moderately expressed RNAs (50> FPKM >10) | |
|
Lower expressed RNAs (10> FPKM >1) | |
|
The lowest expressed RNAs (FPKM value of 0 or 1) |
|
| Staining level colour codes |
|
|
Highly expressed protein | |
|
Moderately expressed protein | |
|
Lower expressed protein | |
|
Not Detected |
|
|
| |
|
> Protein (NX_Q96PB8)