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> Protein (NX_Q96RY7)
Protein (NX_Q96RY7)
Protein
Gene SymbolIFT140 to neXtProt (NX_Q96RY7)
DescriptionIntraflagellar transport protein 140 homolog
Chromosome16
Location16p13.3 (1560428 ~ 1662111) to Ensembl
Sequene Features : Isoforms 2, Variants 219, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.regulation of cilium assembly
.renal system development
.protein localization to cilium
  + 5 more...
.N/A .ciliary tip
.primary cilium
.ciliary basal body
  + 4 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 219 7
2014-09-19protein level
1 181 7
2014-05-27protein level
1 172 7
2014-02-25protein level
1 173 7
2013-12-09protein level
1 126 7
2013-11-01protein level
1 122 5
2013-09-12protein level
1 122 5
2013-08-17protein level
1 122 5
2013-07-15protein level
1 98 4
2013-06-11protein level
1 98 4
2013-02-12protein level
1 67 1
2012-12-20protein level
1 63 1
2012-10-30protein level
1 74 1
2012-10-07protein level
1 74 1
2012-08-24protein level
1 53 1
2012-07-28protein level
1 53 1
2012-06-08protein level
1 54 1
2012-05-07protein level
1 54 1
2012-04-10protein level
1 54 1
2012-01-13protein level
1 24 1
2011-12-20protein level
1 24 1
2011-11-11protein level
1 24 1
2011-08-23protein level
1 24 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q96RY7-1
43 31 0 165087.0125
NX_Q96RY7-2
0 31 0 75523.4292
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
ascites25
blood40
brain20
connective tissue6
embryonic tissue65
eye38
intestine17
kidney9
liver4
lung29
lymph22
mammary gland13
nerve64
ovary108
pancreas37
parathyroid48
placenta14
prostate10
skin9
stomach31
testis91
thymus25
tonsil58
uterus21
vascular19
Health State
TissuesTPM*
normal18
breast (mammary gland) tumor21
chondrosarcoma12
colorectal tumor8
gastrointestinal tumor42
germ cell tumor22
glioma18
leukemia31
liver tumor10
lung tumor48
lymphoma13
non-neoplasia20
ovarian tumor131
pancreatic tumor76
primitive neuroectodermal tumor of the CNS47
prostate cancer19
skin tumor15
uterine tumor44
Developmental Stage
TissuesTPM*
adult26
embryoid body85
blastocyst97
fetus21
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue5
adrenal gland7.6
appendix3.4
bone marrow1.9
cerebral cortex6.8
colon4.1
duodenum3.1
esophagus3.6
gallbladder8.9
heart muscle4.3
kidney9
liver1.7
lung12.2
lymph node3.9
ovary11.8
pancreas3.7
placenta4.3
prostate7.1
salivary gland5.1
skin5.3
small intestine3.2
spleen4.5
stomach7
testis34.2
thyroid gland18.4
urinary bladder6.4
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(#266920, phenotype) Mainzer-saldino syndrome; MZSDSOMIM
2(*614620, gene) Intraflagellar transport 140, chlamydomonas, homolog of; IFT140OMIM


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