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> Protein (NX_Q9BPW4)
Protein (NX_Q9BPW4)
Protein
Gene SymbolAPOL4 to neXtProt (NX_Q9BPW4)
DescriptionApolipoprotein L4
Chromosome22
Location22q12.3 (36585172 ~ 36600886) to Ensembl
Sequene Features : Isoforms 3, Variants 46, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.lipoprotein metabolic process
.lipid transport
.lipid metabolic process
.lipid binding .extracellular space
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
3 46 0
2014-09-19transcript level
3 39 0
2014-05-27transcript level
3 39 0
2014-02-25transcript level
3 39 0
2013-12-09transcript level
3 35 0
2013-11-01transcript level
3 35 0
2013-09-12transcript level
3 35 0
2013-08-17transcript level
3 35 0
2013-07-15transcript level
3 26 0
2013-06-11transcript level
3 26 0
2013-02-12transcript level
3 18 0
2012-12-20transcript level
3 11 0
2012-10-30transcript level
3 18 0
2012-10-07transcript level
3 18 0
2012-08-24transcript level
3 18 0
2012-07-28transcript level
3 18 0
2012-06-08transcript level
3 6 0
2012-05-07transcript level
3 6 0
2012-04-10transcript level
3 6 0
2012-01-13transcript level
3 6 0
2011-12-20transcript level
3 6 0
2011-11-11transcript level
3 6 0
2011-08-23transcript level
3 6 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9BPW4-1
2 15 0 39139.7756
NX_Q9BPW4-2
0 16 0 38724.511
NX_Q9BPW4-3
0 16 0 38595.4687
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland30
blood16
brain4
eye4
heart22
intestine12
kidney9
liver29
lung17
lymph node22
mammary gland19
placenta49
prostate63
spleen56
stomach31
testis9
thymus50
trachea96
uterus12
vascular19
Health State
TissuesTPM*
normal12
breast (mammary gland) tumor32
gastrointestinal tumor8
germ cell tumor41
kidney tumor14
leukemia52
liver tumor52
lung tumor29
primitive neuroectodermal tumor of the CNS7
Developmental Stage
TissuesTPM*
adult11
neonate32
fetus14
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue6.5
adrenal gland2.5
appendix7.5
bone marrow1.9
cerebral cortex1.8
colon3.9
duodenum6.3
esophagus4.6
gallbladder7
heart muscle5.4
kidney3.6
liver1.6
lung14.8
lymph node6.2
ovary5.8
placenta4
prostate17.4
salivary gland2.4
skin2.5
small intestine4.8
spleen4.4
stomach7
testis1.5
thyroid gland1.3
urinary bladder16.1
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*607254, gene) Apolipoprotein l-iv; APOL4OMIM


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