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> Protein (NX_Q9BQ04)
Protein (NX_Q9BQ04)
Protein
Gene SymbolRBM4B to neXtProt (NX_Q9BQ04)
DescriptionRNA-binding protein 4B
Chromosome11
Location11q13.2 (66432469 ~ 66445392) to Ensembl
Sequene Features : Isoforms 1, Variants 43, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.entrainment of circadian clock by photoperiod
.circadian regulation of gene expression
.positive regulation of gene expression
  + 4 more...
.poly(A) RNA binding
.zinc ion binding
.nucleotide binding
.nucleolus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 43 2
2014-09-19protein level
1 37 2
2014-05-27protein level
1 37 8
2014-02-25protein level
1 37 8
2013-12-09protein level
1 28 8
2013-11-01protein level
1 28 8
2013-09-12protein level
1 28 8
2013-08-17protein level
1 28 8
2013-07-15protein level
1 19 3
2013-06-11protein level
1 19 3
2013-02-12protein level
1 9 2
2012-12-20protein level
1 9 2
2012-10-30protein level
1 13 2
2012-10-07protein level
1 13 2
2012-08-24protein level
1 11 2
2012-07-28protein level
1 11 2
2012-06-08protein level
1 11 2
2012-05-07protein level
1 11 2
2012-04-10protein level
1 11 2
2012-01-13protein level
1 6 2
2011-12-20protein level
1 6 2
2011-11-11protein level
1 6 1
2011-08-23protein level
1 6 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9BQ04-1
6 0 14 40124.2531
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-715531,EBI-948630 DZIP3  
  .protein polyubiquitination .poly(A) RNA binding
.polyubiquitin binding
.phosphatase binding
  + 4 more...
.cytoplasm
2 EBI-715531,EBI-8463848 SMYD1  
  .negative regulation of transcription, DNA-templated
.positive regulation of myoblast differentiation
.skeletal muscle cell differentiation
  + 4 more...
.metal ion binding
.histone-lysine N-methyltransferase activity
.transcription corepressor activity
.DNA binding
.cytoplasm
.nucleus
3 EBI-715531,EBI-1018153 HNRNPUL1  
  .gene expression
.response to virus
.RNA splicing
  + 4 more...
.poly(A) RNA binding
.enzyme binding
.RNA binding
.ribonucleoprotein complex
.nucleoplasm
.nucleus
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland30
blood40
bone13
brain50
cervix61
connective tissue26
embryonic tissue18
esophagus198
eye43
heart22
intestine51
kidney42
larynx85
liver24
lung38
lymph90
mammary gland39
mouth15
muscle18
ovary9
pancreas9
pharynx24
pituitary gland121
placenta28
prostate42
skin18
spleen37
stomach62
testis9
thymus37
umbilical cord72
uterus86
Health State
TissuesTPM*
normal36
breast (mammary gland) tumor64
cervical tumor28
colorectal tumor62
esophageal tumor231
gastrointestinal tumor33
germ cell tumor60
glioma37
head and neck tumor22
kidney tumor58
leukemia10
liver tumor31
lung tumor48
lymphoma55
non-neoplasia41
ovarian tumor13
primitive neuroectodermal tumor of the CNS55
prostate cancer67
retinoblastoma21
skin tumor31
soft tissue/muscle tissue tumor63
uterine tumor55
Developmental Stage
TissuesTPM*
adult36
embryoid body14
blastocyst16
neonate32
fetus62
infant85
juvenile35
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue9.8
adrenal gland19.4
appendix16.4
bone marrow6.6
cerebral cortex19.8
colon12.7
duodenum13.5
esophagus10.3
gallbladder13.2
heart muscle9.3
kidney15.2
liver6.4
lung12.4
lymph node20.7
ovary34.5
pancreas4.9
placenta15.1
prostate20.6
salivary gland14.9
skin20.3
small intestine14.1
spleen16.8
stomach14.7
testis19.7
thyroid gland15.9
urinary bladder17
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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