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> Protein (NX_Q9BSH3)
Protein (NX_Q9BSH3)
Protein
Gene SymbolNICN1 to neXtProt (NX_Q9BSH3)
DescriptionNicolin-1
Chromosome3
Location3p21.31 (49460379 ~ 49466759) to Ensembl
Sequene Features : Isoforms 2, Variants 16, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .microtubule
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
2 16 0
2014-09-19transcript level
2 14 0
2014-05-27transcript level
2 14 1
2014-02-25transcript level
2 14 1
2013-12-09transcript level
2 8 1
2013-11-01transcript level
2 7 1
2013-09-12transcript level
2 7 1
2013-08-17transcript level
2 7 1
2013-07-15transcript level
2 4 1
2013-06-11transcript level
2 4 1
2013-02-12transcript level
2 2 2
2012-12-20transcript level
2 2 2
2012-10-30transcript level
2 3 2
2012-10-07transcript level
2 3 1
2012-08-24transcript level
2 2 1
2012-07-28transcript level
2 2 1
2012-06-08transcript level
2 3 1
2012-05-07transcript level
2 3 1
2012-04-10transcript level
2 3 1
2012-01-13transcript level
2 3 1
2011-12-20transcript level
2 3 1
2011-11-11transcript level
2 3 0
2011-08-23transcript level
2 3 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9BSH3-1
3 10 0 24186.1683
NX_Q9BSH3-2
0 10 0 19492.9561
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue77
ascites25
bladder33
blood65
bone13
bone marrow41
brain51
connective tissue26
embryonic tissue4
esophagus49
eye19
intestine17
kidney28
liver29
lung32
lymph67
mammary gland26
mouth30
muscle47
ovary19
pancreas4
parathyroid145
pharynx73
placenta14
prostate63
spleen18
stomach31
testis57
thymus12
tonsil58
uterus38
Health State
TissuesTPM*
normal31
breast (mammary gland) tumor42
chondrosarcoma12
colorectal tumor35
esophageal tumor57
gastrointestinal tumor25
germ cell tumor7
glioma65
head and neck tumor7
leukemia74
liver tumor52
lung tumor48
lymphoma41
non-neoplasia20
ovarian tumor26
pancreatic tumor9
prostate cancer77
uterine tumor11
Developmental Stage
TissuesTPM*
adult25
fetus28
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue9.7
adrenal gland9.8
appendix9.3
bone marrow5.5
cerebral cortex18.2
colon7.1
duodenum7.7
esophagus7.9
gallbladder11.8
heart muscle11.7
kidney12.5
liver5.6
lung15.5
lymph node13.5
ovary16.6
pancreas4.9
placenta7.3
prostate14
salivary gland10.1
skin13
small intestine9.1
spleen16.4
stomach10.3
testis16.2
thyroid gland19.2
urinary bladder9.8
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*611516, gene) Nicolin 1; NICN1OMIM


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