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> Protein (NX_Q9BVA0)
Protein (NX_Q9BVA0)
Protein
Gene SymbolKATNB1 to neXtProt (NX_Q9BVA0)
DescriptionKatanin p80 WD40 repeat-containing subunit B1
Chromosome16
Location16q21 (57769642 ~ 57791162) to Ensembl
Sequene Features : Isoforms 1, Variants 67, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.cell division
.microtubule severing
.positive regulation of microtubule depolymerization
  + 6 more...
.protein heterodimerization activity
.microtubule binding
.neuronal cell body
.midbody
.growth cone
  + 10 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 67 2
2014-09-19protein level
1 49 2
2014-05-27protein level
1 49 2
2014-02-25protein level
1 49 2
2013-12-09protein level
1 35 2
2013-11-01protein level
1 35 1
2013-09-12protein level
1 35 1
2013-08-17protein level
1 35 1
2013-07-15protein level
1 27 1
2013-06-11protein level
1 27 1
2013-02-12protein level
1 19 1
2012-12-20protein level
1 20 1
2012-10-30protein level
1 20 1
2012-10-07protein level
1 20 1
2012-08-24protein level
1 19 1
2012-07-28protein level
1 19 1
2012-06-08protein level
1 22 1
2012-05-07protein level
1 20 1
2012-04-10protein level
1 20 1
2012-01-13protein level
1 12 1
2011-12-20protein level
1 12 1
2011-11-11protein level
1 12 1
2011-08-23protein level
1 12 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9BVA0-1
31 0 0 72287.7479
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland30
ascites25
bladder33
blood122
bone55
bone marrow41
brain64
cervix61
connective tissue33
embryonic tissue32
eye76
heart22
intestine107
kidney37
liver4
lung95
lymph22
lymph node44
mammary gland26
muscle188
ovary118
pancreas74
pituitary gland60
placenta38
prostate47
skin123
stomach10
testis91
thymus12
uterus43
Health State
TissuesTPM*
normal46
adrenal tumor79
breast (mammary gland) tumor32
cervical tumor28
chondrosarcoma24
colorectal tumor88
gastrointestinal tumor16
germ cell tumor49
glioma130
kidney tumor58
leukemia95
lung tumor136
lymphoma69
ovarian tumor78
pancreatic tumor85
primitive neuroectodermal tumor of the CNS236
prostate cancer57
retinoblastoma21
skin tumor207
soft tissue/muscle tissue tumor215
uterine tumor88
Developmental Stage
TissuesTPM*
adult51
blastocyst81
fetus55
infant127
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue6.8
adrenal gland8.3
appendix10.8
bone marrow13.9
cerebral cortex17.6
colon8
duodenum10.5
esophagus10.2
gallbladder7.8
heart muscle7.8
kidney7.5
liver2.4
lung10.3
lymph node10.5
ovary7.5
pancreas5.5
placenta8.1
prostate7.9
salivary gland8.3
skin21.7
small intestine7.9
spleen10.3
stomach8.9
testis30.9
thyroid gland8.9
urinary bladder8.2
Tissues
TissuesExpression level
adrenal glandLow
appendixMedium
breastMedium
bronchusMedium
cerebral cortexMedium
cervix, uterineMedium
colonMedium
duodenumMedium
endometrium 1Medium
endometrium 2Low
epididymisLow
esophagusMedium
fallopian tubeMedium
gallbladderMedium
heart muscleMedium
hippocampusLow
kidneyMedium
lateral ventricleMedium
liverLow
lungMedium
nasopharynxMedium
oral mucosaLow
pancreasLow
parathyroid glandMedium
placentaLow
prostateMedium
rectumMedium
salivary glandLow
seminal vesicleLow
skeletal muscleLow
skin 1Medium
skin 2Low
small intestineMedium
soft tissue 1Medium
soft tissue 2Medium
stomach 1Low
stomach 2Medium
testisMedium
thyroid glandLow
tonsilLow
urinary bladderMedium
vaginaLow
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*602703, gene) Katanin, p80 subunit, b1; KATNB1OMIM


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