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> Protein (NX_Q9BWX1)
Protein (NX_Q9BWX1)
Protein
Gene SymbolPHF7 to neXtProt (NX_Q9BWX1)
DescriptionPHD finger protein 7
Chromosome3
Location3p21.1 (52444673 ~ 52457657) to Ensembl
Sequene Features : Isoforms 2, Variants 40, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .zinc ion binding .microtubule organizing center
.nucleoplasm
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
2 40 0
2014-09-19transcript level
2 32 0
2014-05-27transcript level
2 32 0
2014-02-25transcript level
2 32 0
2013-12-09transcript level
2 26 0
2013-11-01transcript level
2 26 0
2013-09-12transcript level
2 26 0
2013-08-17transcript level
2 26 0
2013-07-15transcript level
2 14 0
2013-06-11transcript level
2 14 0
2013-02-12transcript level
1 9 0
2012-12-20transcript level
1 9 0
2012-10-30transcript level
1 9 0
2012-10-07transcript level
1 9 0
2012-08-24transcript level
1 9 0
2012-07-28transcript level
1 7 0
2012-06-08transcript level
1 8 0
2012-05-07transcript level
1 6 0
2012-04-10transcript level
1 6 0
2012-01-13transcript level
1 4 0
2011-12-20transcript level
1 4 0
2011-11-11transcript level
1 4 0
2011-08-23transcript level
1 4 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9BWX1-1
3 12 0 43737.8059
NX_Q9BWX1-2
0 12 0 39232.8898
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-4307517,EBI-745527 UBE2D4  
  .protein K6-linked ubiquitination
.protein K11-linked ubiquitination
.protein K48-linked ubiquitination
  + 4 more...
.ubiquitin conjugating enzyme activity
.ligase activity
.ATP binding
.ubiquitin-protein transferase activity
.N/A
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
bladder33
blood16
brain47
cervix20
embryonic tissue9
eye19
heart11
intestine17
kidney4
liver4
lung14
lymph node55
ovary19
pancreas18
placenta24
prostate5
salivary gland197
skin9
spleen18
testis1484
thymus12
uterus12
Health State
TissuesTPM*
normal163
cervical tumor28
germ cell tumor37
glioma18
head and neck tumor29
leukemia10
lung tumor9
ovarian tumor26
pancreatic tumor19
primitive neuroectodermal tumor of the CNS15
prostate cancer9
Developmental Stage
TissuesTPM*
adult24
embryoid body14
blastocyst16
fetus66
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue5.5
adrenal gland5.1
appendix5.6
bone marrow7.1
cerebral cortex4.9
colon8.4
duodenum6.3
esophagus4.4
gallbladder4.6
heart muscle11.4
kidney5.1
liver4.7
lung5
lymph node7
ovary4.2
pancreas3.8
placenta3.7
prostate5.4
salivary gland4.5
skin7.9
small intestine7.7
spleen5.3
stomach4.1
testis879.2
thyroid gland5
urinary bladder4.7
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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