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> Protein (NX_Q9BXA9)
Protein (NX_Q9BXA9)
Protein
Gene SymbolSALL3 to neXtProt (NX_Q9BXA9)
DescriptionSal-like protein 3
Chromosome18
Location18q23 (76740275 ~ 76762677) to Ensembl
Sequene Features : Isoforms 4, Variants 220, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.negative regulation of smoothened signaling pathway
.hindlimb morphogenesis
.forelimb morphogenesis
  + 3 more...
.metal ion binding
.DNA binding
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
4 220 8
2014-09-19protein level
4 147 8
2014-05-27protein level
4 147 8
2014-02-25protein level
4 43 8
2013-12-09protein level
4 18 8
2013-11-01protein level
4 18 7
2013-09-12protein level
4 18 7
2013-08-17protein level
4 18 7
2013-07-15protein level
4 18 7
2013-06-11protein level
4 18 7
2013-02-12protein level
4 18 26
2012-12-20protein level
4 16 26
2012-10-30protein level
4 21 26
2012-10-07protein level
4 21 7
2012-08-24protein level
4 21 7
2012-07-28protein level
4 21 7
2012-06-08protein level
4 28 7
2012-05-07protein level
4 28 7
2012-04-10protein level
4 28 7
2012-01-13protein level
4 21 7
2011-12-20protein level
4 21 7
2011-11-11protein level
4 21 7
2011-08-23protein level
4 21 7
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9BXA9-1
0 45 7 135259.8676
NX_Q9BXA9-2
0 41 7 127250.8638
NX_Q9BXA9-3
0 35 7 113092.3463
NX_Q9BXA9-4
0 39 7 121101.3501
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain6
embryonic tissue18
eye9
kidney14
prostate5
skin4
testis2
Health State
TissuesTPM*
normal4
germ cell tumor3
glioma55
skin tumor7
Developmental Stage
TissuesTPM*
adult1
blastocyst65
fetus1
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
cerebral cortex2.9
kidney1.3
prostate1.6
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*605079, gene) Sal-like 3; SALL3OMIM


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