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> Protein (NX_Q9BXT4)
Protein (NX_Q9BXT4)
Protein
Gene SymbolTDRD1 to neXtProt (NX_Q9BXT4)
DescriptionTudor domain-containing protein 1
Chromosome10
Location10q25.3 (115939029 ~ 115992063) to Ensembl
Sequene Features : Isoforms 4, Variants 161, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.meiotic cell cycle
.DNA methylation involved in gamete generation
.piRNA metabolic process
  + 5 more...
.metal ion binding .pi-body
.P granule
.chromatoid body
.cytoplasm
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
4 161 0
2014-09-19protein level
4 126 0
2014-05-27transcript level
4 126 0
2014-02-25transcript level
4 125 0
2013-12-09transcript level
4 101 0
2013-11-01transcript level
4 83 0
2013-09-12transcript level
4 83 0
2013-08-17transcript level
4 83 0
2013-07-15transcript level
4 58 0
2013-06-11transcript level
4 58 0
2013-02-12transcript level
4 34 0
2012-12-20transcript level
4 33 0
2012-10-30transcript level
4 33 0
2012-10-07transcript level
4 33 0
2012-08-24transcript level
4 30 0
2012-07-28transcript level
4 30 0
2012-06-08transcript level
4 5 0
2012-05-07transcript level
4 5 0
2012-04-10transcript level
4 5 0
2012-01-13transcript level
4 5 0
2011-12-20transcript level
4 5 0
2011-11-11transcript level
4 5 0
2011-08-23protein level
4 5 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9BXT4-1
0 67 0 131938.5232
NX_Q9BXT4-2
1 59 0 119054.9955
NX_Q9BXT4-3
1 67 0 132804.059
NX_Q9BXT4-4
2 38 0 79118.8559
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-10301451,EBI-717422 TFCP2  
  .regulation of transcription from RNA polymerase II promoter
.transcription, DNA-templated
.sequence-specific DNA binding
.protein C-terminus binding
.sequence-specific DNA binding transcription factor activity
.DNA binding
.nucleus
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain2
liver4
pancreas9
prostate10
testis68
trachea19
Health State
TissuesTPM*
normal3
liver tumor10
pancreatic tumor19
prostate cancer19
Developmental Stage
TissuesTPM*
adult3
fetus1
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
prostate1
testis15.4
Tissues
TissuesExpression level
adrenal glandHigh
appendixMedium
bone marrowMedium
breastMedium
bronchusMedium
cerebellumMedium
cerebral cortexMedium
cervix, uterineLow
colonHigh
duodenumHigh
endometrium 1Low
endometrium 2High
epididymisMedium
esophagusMedium
fallopian tubeMedium
gallbladderHigh
heart muscleHigh
hippocampusLow
kidneyHigh
lateral ventricleLow
liverMedium
lungMedium
lymph nodeMedium
nasopharynxMedium
oral mucosaLow
ovaryMedium
pancreasHigh
parathyroid glandMedium
placentaMedium
prostateMedium
rectumMedium
salivary glandMedium
seminal vesicleMedium
skeletal muscleMedium
skin 1Medium
skin 2Medium
small intestineMedium
smooth muscleMedium
soft tissue 1Medium
soft tissue 2Medium
spleenLow
stomach 1High
stomach 2Medium
testisHigh
thyroid glandMedium
tonsilMedium
urinary bladderMedium
vaginaLow
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*605796, gene) Tudor domain-containing protein 1; TDRD1OMIM


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