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> Protein (NX_Q9C0B9)
Protein (NX_Q9C0B9)
Protein
Gene SymbolZCCHC2 to neXtProt (NX_Q9C0B9)
DescriptionZinc finger CCHC domain-containing protein 2
Chromosome18
Location18q21.33 (60190240 ~ 60254942) to Ensembl
Sequene Features : Isoforms 2, Variants 86, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .phosphatidylinositol binding
.zinc ion binding
.nucleic acid binding
.cytoplasm
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 86 2
2014-09-19protein level
1 65 2
2014-05-27protein level
1 65 2
2014-02-25protein level
1 65 2
2013-12-09protein level
1 49 2
2013-11-01protein level
1 49 1
2013-09-12protein level
1 49 1
2013-08-17protein level
1 49 1
2013-07-15protein level
1 28 1
2013-06-11protein level
1 28 1
2013-02-12protein level
1 12 5
2012-12-20protein level
1 10 5
2012-10-30protein level
1 21 5
2012-10-07protein level
1 21 5
2012-08-24protein level
1 21 5
2012-07-28protein level
1 21 5
2012-06-08protein level
1 24 5
2012-05-07protein level
1 19 5
2012-04-10protein level
1 19 5
2012-01-13protein level
1 15 5
2011-12-20protein level
1 15 5
2011-11-11protein level
1 15 5
2011-08-23protein level
1 15 5
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9C0B9-1
16 29 0 125857.4057
NX_Q9C0B9-2
1 29 0 91681.1467
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
blood24
bone marrow41
brain7
connective tissue13
embryonic tissue14
eye9
intestine4
kidney28
larynx42
liver24
lung32
lymph node22
mammary gland13
mouth15
muscle37
pancreas14
placenta3
prostate21
skin14
spleen18
stomach10
testis13
thymus12
thyroid42
tonsil58
trachea57
umbilical cord72
uterus30
Health State
TissuesTPM*
normal15
breast (mammary gland) tumor10
chondrosarcoma24
gastrointestinal tumor8
germ cell tumor26
glioma18
head and neck tumor22
kidney tumor14
leukemia84
liver tumor31
pancreatic tumor19
prostate cancer28
soft tissue/muscle tissue tumor15
uterine tumor22
Developmental Stage
TissuesTPM*
adult20
blastocyst16
neonate32
fetus28
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue7.9
adrenal gland4.7
appendix7
bone marrow17.7
cerebral cortex7.5
colon6.5
duodenum7.4
esophagus5
gallbladder9.9
heart muscle5.1
kidney5.1
liver15
lung9.2
lymph node7.9
ovary8.1
pancreas3.6
placenta8.9
prostate8.6
salivary gland36.3
skin6
small intestine6.5
spleen11
stomach5.9
testis19.4
thyroid gland7
urinary bladder7.1
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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