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> Protein (NX_Q9C0G0)
Protein (NX_Q9C0G0)
Protein
Gene SymbolZNF407 to neXtProt (NX_Q9C0G0)
DescriptionZinc finger protein 407
Chromosome18
Location18q22.3 (72265106 ~ 72777627) to Ensembl
Sequene Features : Isoforms 3, Variants 234, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.regulation of transcription, DNA-templated
.transcription, DNA-templated
.zinc ion binding
.DNA binding
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
3 234 1
2014-09-19protein level
3 166 1
2014-05-27protein level
3 166 1
2014-02-25protein level
3 165 1
2013-12-09protein level
3 113 1
2013-11-01protein level
3 111 1
2013-09-12protein level
3 111 1
2013-08-17protein level
3 111 1
2013-07-15protein level
3 76 0
2013-06-11protein level
3 76 0
2013-02-12protein level
3 31 0
2012-12-20protein level
3 25 0
2012-10-30protein level
3 43 0
2012-10-07protein level
3 43 0
2012-08-24transcript level
3 41 0
2012-07-28transcript level
3 41 0
2012-06-08transcript level
3 12 0
2012-05-07transcript level
3 12 0
2012-04-10transcript level
3 12 0
2012-01-13transcript level
3 12 0
2011-12-20transcript level
3 19 0
2011-11-11transcript level
3 19 0
2011-08-23transcript level
3 19 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9C0G0-1
11 88 2 247209.9322
NX_Q9C0G0-2
1 88 2 202288.7403
NX_Q9C0G0-3
2 80 0 183964.1003
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue77
bone13
brain10
connective tissue6
embryonic tissue9
eye9
intestine8
kidney4
liver4
lung11
lymph node77
mammary gland26
mouth15
muscle9
placenta3
prostate21
skin18
testis9
thymus37
thyroid42
trachea38
uterus4
Health State
TissuesTPM*
normal14
bladder carcinoma113
chondrosarcoma12
colorectal tumor17
germ cell tumor15
head and neck tumor7
liver tumor10
primitive neuroectodermal tumor of the CNS7
skin tumor7
soft tissue/muscle tissue tumor7
uterine tumor11
Developmental Stage
TissuesTPM*
adult12
embryoid body28
fetus12
juvenile35
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue2.4
adrenal gland2.1
appendix3.6
bone marrow3.8
cerebral cortex2.6
colon2.9
duodenum2.1
esophagus3.7
gallbladder3.1
heart muscle3.3
kidney2.8
liver1.6
lung2.6
lymph node4
ovary5.1
pancreas1.4
placenta2.6
prostate2.9
salivary gland2
skin2.4
small intestine2.3
spleen3.6
stomach2.4
testis5.3
thyroid gland4.8
urinary bladder3.8
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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