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> Protein (NX_Q9H0T7)
Protein (NX_Q9H0T7)
Protein
Gene SymbolRAB17 to neXtProt (NX_Q9H0T7)
DescriptionRas-related protein Rab-17
Chromosome2
Location2q37.3 (238482965 ~ 238510257) to Ensembl
Sequene Features : Isoforms 2, Variants 31, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.regulation of synapse assembly
.regulation of filopodium assembly
.regulation of dendrite development
  + 11 more...
.GDP binding
.GTP binding
.GTPase activity
.extracellular exosome
.recycling endosome membrane
.recycling endosome
  + 9 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 31 2
2014-09-19protein level
1 28 2
2014-05-27protein level
1 28 2
2014-02-25protein level
1 28 2
2013-12-09protein level
1 20 2
2013-11-01protein level
1 19 2
2013-09-12protein level
1 19 2
2013-08-17protein level
1 19 2
2013-07-15protein level
1 13 2
2013-06-11protein level
1 13 2
2013-02-12protein level
1 10 2
2012-12-20protein level
1 11 2
2012-10-30protein level
1 13 2
2012-10-07protein level
1 13 2
2012-08-24transcript level
1 11 2
2012-07-28transcript level
1 11 2
2012-06-08transcript level
1 12 2
2012-05-07transcript level
1 12 2
2012-04-10transcript level
1 12 2
2012-01-13transcript level
1 7 2
2011-12-20transcript level
1 7 2
2011-11-11transcript level
1 7 2
2011-08-23protein level
1 7 2
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9H0T7-1
7 5 0 23476.0426
NX_Q9H0T7-2
0 5 0 9387.6293
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-721615,EBI-740978 MAGEA1  
  .negative regulation of Notch signaling pathway
.transcription, DNA-templated
.negative regulation of transcription from RNA polymerase II promoter
.histone deacetylase binding .plasma membrane
.cytoplasm
.nucleus
2 EBI-721615,EBI-10175124 FAM9B  
  .spermatid development .N/A .nucleoplasm
3 EBI-721615,EBI-721300 C11orf49  
  .N/A .N/A .nucleoplasm
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
ascites75
bladder66
blood8
brain3
cervix20
connective tissue13
embryonic tissue9
eye33
intestine25
kidney33
larynx127
liver92
lung41
lymph node11
mammary gland52
ovary59
pancreas4
parathyroid291
placenta77
prostate31
skin56
stomach20
testis4
thymus37
thyroid21
trachea19
uterus12
Health State
TissuesTPM*
normal24
breast (mammary gland) tumor85
cervical tumor28
chondrosarcoma24
colorectal tumor17
gastrointestinal tumor33
germ cell tumor37
head and neck tumor29
kidney tumor14
leukemia10
liver tumor20
lung tumor29
non-neoplasia20
ovarian tumor78
pancreatic tumor9
prostate cancer9
skin tumor79
uterine tumor33
Developmental Stage
TissuesTPM*
adult34
fetus25
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adrenal gland1.7
appendix2.5
colon13
duodenum70.3
esophagus2.7
gallbladder11.1
heart muscle2
kidney57.6
liver55.2
lung26.8
ovary1.4
pancreas20.1
placenta14.4
prostate9.4
salivary gland36.7
skin1.2
small intestine66.4
stomach24.9
thyroid gland31.7
urinary bladder5.4
Tissues
TissuesExpression level
appendixLow
bone marrowLow
breastLow
bronchusMedium
cerebellumLow
cerebral cortexLow
colonMedium
duodenumMedium
endometrium 1Low
endometrium 2Medium
epididymisHigh
esophagusLow
fallopian tubeMedium
gallbladderMedium
heart muscleMedium
kidneyMedium
liverMedium
lungMedium
nasopharynxMedium
ovaryMedium
pancreasMedium
parathyroid glandMedium
placentaLow
prostateLow
rectumLow
salivary glandLow
seminal vesicleHigh
skeletal muscleMedium
skin 1Medium
skin 2Low
small intestineMedium
soft tissue 1Medium
soft tissue 2Medium
stomach 1Medium
stomach 2Low
testisLow
thyroid glandMedium
urinary bladderMedium
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*602206, gene) Ras-associated protein rab17; RAB17OMIM


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