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> Protein (NX_Q9H1D9)
Protein (NX_Q9H1D9)
Protein
Gene SymbolPOLR3F to neXtProt (NX_Q9H1D9)
DescriptionDNA-directed RNA polymerase III subunit RPC6
Chromosome20
Location20p11.23 (18447771 ~ 18465287) to Ensembl
Sequene Features : Isoforms 1, Variants 21, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.defense response to virus
.positive regulation of innate immune response
.innate immune response
  + 7 more...
.DNA-directed RNA polymerase activity
.DNA binding
.cytosol
.DNA-directed RNA polymerase III complex
.nucleoplasm
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 21 1
2014-09-19protein level
1 18 1
2014-05-27protein level
1 18 1
2014-02-25protein level
1 18 1
2013-12-09protein level
1 12 1
2013-11-01protein level
1 12 1
2013-09-12protein level
1 12 0
2013-08-17protein level
1 12 0
2013-07-15protein level
1 6 0
2013-06-11protein level
1 6 0
2013-02-12protein level
1 3 0
2012-12-20protein level
1 4 0
2012-10-30protein level
1 6 0
2012-10-07protein level
1 6 0
2012-08-24protein level
1 6 0
2012-07-28protein level
1 6 0
2012-06-08protein level
1 9 0
2012-05-07protein level
1 8 0
2012-04-10protein level
1 8 0
2012-01-13protein level
1 7 0
2011-12-20protein level
1 7 0
2011-11-11protein level
1 7 0
2011-08-23protein level
1 7 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9H1D9-1
15 0 0 35661.0276
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-710067,EBI-2827376 PNRC1  
  .regulation of transcription, DNA-templated
.transcription, DNA-templated
.N/A .nucleus
2 EBI-710067,EBI-395940 PRPF4B  
  .RNA splicing
.protein phosphorylation
.mRNA splicing, via spliceosome
.poly(A) RNA binding
.ATP binding
.protein serine/threonine kinase activity
.protein kinase activity
.catalytic step 2 spliceosome
.chromosome
.nucleoplasm
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland30
blood40
brain33
cervix20
connective tissue26
embryonic tissue32
eye23
heart22
intestine4
kidney33
liver24
lung14
mammary gland46
muscle9
nerve128
ovary9
pancreas4
pharynx24
pituitary gland121
placenta28
prostate15
skin52
testis25
thymus12
trachea38
uterus43
vascular19
Health State
TissuesTPM*
normal26
breast (mammary gland) tumor53
chondrosarcoma12
germ cell tumor3
glioma9
kidney tumor29
leukemia10
liver tumor31
pancreatic tumor9
primitive neuroectodermal tumor of the CNS39
prostate cancer19
retinoblastoma21
skin tumor7
soft tissue/muscle tissue tumor15
uterine tumor33
Developmental Stage
TissuesTPM*
adult23
embryoid body57
neonate32
fetus26
infant127
juvenile35
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue5.6
adrenal gland6.7
appendix6.6
bone marrow6.3
cerebral cortex11.6
colon5.2
duodenum4.3
esophagus7.5
gallbladder6.4
heart muscle8.1
kidney6.9
liver3.3
lung6.4
lymph node7.1
ovary7.3
pancreas2.9
placenta5.9
prostate6.4
salivary gland3.5
skin5.9
small intestine4.4
spleen5.7
stomach5.2
testis9.3
thyroid gland10.5
urinary bladder6.3
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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