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> Protein (NX_Q9H6J7)
Protein (NX_Q9H6J7)
Protein
Gene SymbolC11orf49 to neXtProt (NX_Q9H6J7)
DescriptionUPF0705 protein C11orf49
Chromosome11
Location11p11.2 (46958240 ~ 47185936) to Ensembl
Sequene Features : Isoforms 4, Variants 39, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .nucleoplasm
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
4 39 1
2014-09-19protein level
4 27 1
2014-05-27protein level
4 27 1
2014-02-25protein level
4 27 1
2013-12-09protein level
4 16 1
2013-11-01protein level
4 13 1
2013-09-12protein level
4 13 0
2013-08-17protein level
4 13 0
2013-07-15protein level
4 10 0
2013-06-11protein level
4 10 0
2013-02-12protein level
4 6 0
2012-12-20protein level
3 5 0
2012-10-30protein level
3 6 0
2012-10-07protein level
3 6 0
2012-08-24transcript level
3 6 0
2012-07-28transcript level
3 6 0
2012-06-08transcript level
3 7 0
2012-05-07transcript level
3 7 0
2012-04-10transcript level
3 7 0
2012-01-13transcript level
3 2 0
2011-12-20transcript level
3 2 0
2011-11-11transcript level
3 2 0
2011-08-23transcript level
3 2 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9H6J7-1
1 17 0 37329.252
NX_Q9H6J7-2
1 17 0 38102.7086
NX_Q9H6J7-3
0 15 0 31295.354
NX_Q9H6J7-4
2 15 0 37506.5808
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-721300,EBI-10171633 PNMA5  
  .positive regulation of apoptotic process .identical protein binding .N/A
2 EBI-721300,EBI-721615 RAB17  
  .regulation of synapse assembly
.regulation of filopodium assembly
.regulation of dendrite development
  + 11 more...
.GDP binding
.GTP binding
.GTPase activity
.extracellular exosome
.recycling endosome membrane
.recycling endosome
  + 9 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue155
ascites75
bladder33
blood32
bone41
bone marrow123
brain102
cervix61
connective tissue46
ear62
embryonic tissue75
eye52
heart22
intestine64
kidney66
liver29
lung74
lymph45
lymph node100
mammary gland19
muscle9
nerve193
ovary98
pancreas23
parathyroid48
placenta77
prostate58
salivary gland148
skin66
stomach73
testis50
thymus62
thyroid42
uterus112
Health State
TissuesTPM*
normal66
breast (mammary gland) tumor32
cervical tumor57
chondrosarcoma72
colorectal tumor62
gastrointestinal tumor59
germ cell tumor72
glioma149
head and neck tumor22
kidney tumor43
leukemia31
liver tumor20
lung tumor145
lymphoma55
non-neoplasia113
ovarian tumor91
pancreatic tumor47
primitive neuroectodermal tumor of the CNS165
prostate cancer96
skin tumor71
soft tissue/muscle tissue tumor55
uterine tumor144
Developmental Stage
TissuesTPM*
adult62
embryoid body85
blastocyst65
fetus43
infant170
juvenile143
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue10.7
adrenal gland15.2
appendix11.6
bone marrow5.5
cerebral cortex44.7
colon25.2
duodenum19.7
esophagus21.7
gallbladder29.4
heart muscle19
kidney22.9
liver5.5
lung21.4
lymph node11.8
ovary28.3
pancreas11
placenta12.1
prostate19.3
salivary gland12.5
skin58.5
small intestine20.3
spleen9.2
stomach22.9
testis28.5
thyroid gland40.9
urinary bladder31
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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