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> Protein (NX_Q9H741)
Protein (NX_Q9H741)
Protein
Gene SymbolC12orf49 to neXtProt (NX_Q9H741)
DescriptionUPF0454 protein C12orf49
Chromosome12
Location12q24.22 (117153593 ~ 117175875) to Ensembl
Sequene Features : Isoforms 1, Variants 31, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .extracellular region
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 31 2
2014-09-19protein level
1 27 2
2014-05-27protein level
1 27 2
2014-02-25protein level
1 27 2
2013-12-09protein level
1 17 2
2013-11-01protein level
1 16 2
2013-09-12protein level
1 16 2
2013-08-17protein level
1 16 2
2013-07-15protein level
1 6 1
2013-06-11protein level
1 6 1
2013-02-12protein level
1 5 1
2012-12-20protein level
1 5 1
2012-10-30protein level
1 6 1
2012-10-07protein level
1 6 1
2012-08-24transcript level
1 5 1
2012-07-28transcript level
1 5 1
2012-06-08transcript level
1 6 1
2012-05-07transcript level
1 6 1
2012-04-10transcript level
1 6 1
2012-01-13transcript level
1 6 1
2011-12-20transcript level
1 6 1
2011-11-11transcript level
1 6 1
2011-08-23transcript level
1 6 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9H741-1
10 0 0 23578.4918
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-2836158,EBI-948001 KRT31  
  .epidermis development .structural constituent of cytoskeleton .extracellular exosome
.intermediate filament
.extracellular space
2 EBI-2836158,EBI-2130429 TRIM54  
  .cell differentiation
.multicellular organismal development
.signal transduction
  + 2 more...
.zinc ion binding
.signal transducer activity
.Z disc
.microtubule associated complex
.microtubule
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
ascites25
bone69
brain20
cervix20
connective tissue20
embryonic tissue37
eye23
intestine38
kidney42
larynx42
liver4
lung14
lymph22
lymph node44
mammary gland59
mouth15
muscle18
pancreas18
pharynx24
placenta21
prostate26
skin28
testis13
thyroid64
uterus17
vascular19
Health State
TissuesTPM*
normal20
breast (mammary gland) tumor42
cervical tumor28
chondrosarcoma72
gastrointestinal tumor16
germ cell tumor41
glioma27
head and neck tumor37
kidney tumor14
leukemia21
liver tumor10
lymphoma55
non-neoplasia31
pancreatic tumor9
primitive neuroectodermal tumor of the CNS39
prostate cancer19
retinoblastoma21
skin tumor47
uterine tumor22
Developmental Stage
TissuesTPM*
adult26
embryoid body28
blastocyst48
fetus12
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue8
adrenal gland8.1
appendix12
bone marrow7.2
cerebral cortex18.6
colon18.5
duodenum9.8
esophagus11.8
gallbladder10.6
heart muscle5.8
kidney18.6
liver2.2
lung32
lymph node14.9
ovary5.6
pancreas4.2
placenta8.5
prostate5.8
salivary gland12.5
skin7
small intestine9.6
spleen10
stomach17.8
testis12.1
thyroid gland71.6
urinary bladder14
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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