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> Protein (NX_Q9HBT6)
Protein (NX_Q9HBT6)
Protein
Gene SymbolCDH20 to neXtProt (NX_Q9HBT6)
DescriptionCadherin-20
Chromosome18
Location18q21.33 (59000815 ~ 59223006) to Ensembl
Sequene Features : Isoforms 1, Variants 155, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.homophilic cell adhesion via plasma membrane adhesion molecules .calcium ion binding .integral component of membrane
.plasma membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 155 4
2014-09-19protein level
1 109 4
2014-05-27protein level
1 109 4
2014-02-25protein level
1 109 4
2013-12-09protein level
1 94 4
2013-11-01protein level
1 88 4
2013-09-12protein level
1 88 4
2013-08-17protein level
1 88 4
2013-07-15protein level
1 63 4
2013-06-11protein level
1 63 4
2013-02-12transcript level
1 20 4
2012-12-20transcript level
1 20 4
2012-10-30transcript level
1 23 4
2012-10-07transcript level
1 23 4
2012-08-24transcript level
1 21 4
2012-07-28transcript level
1 21 4
2012-06-08transcript level
1 26 4
2012-05-07transcript level
1 23 4
2012-04-10transcript level
1 23 4
2012-01-13transcript level
1 16 4
2011-12-20transcript level
1 16 4
2011-11-11transcript level
1 16 4
2011-08-23transcript level
1 16 4
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9HBT6-1
32 0 1 88936.5234
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain15
eye9
vascular19
Health State
TissuesTPM*
normal4
germ cell tumor7
glioma18
Developmental Stage
TissuesTPM*
fetus7
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue4.2
cerebral cortex14.9
esophagus1
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*605807, gene) Cadherin 20; CDH20OMIM


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