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Protein |
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Gene Symbol | CDH20 to neXtProt (NX_Q9HBT6) |
Description | Cadherin-20 |
Chromosome | 18 |
Location | 18q21.33 (59000815 ~ 59223006) to Ensembl |
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Sequene Features : Isoforms 1, Variants 155, PTMs 4 to neXtProt Sequence Features
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Gene Ontologies |
GO: Biological Process |
GO: Mulecular Function |
GO: Cellular Component |
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.homophilic cell adhesion via plasma membrane adhesion molecules |
.calcium ion binding |
.integral component of membrane .plasma membrane |
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Proteomic Evidences |
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Release | | Protein Evidence | | Pr | | Ab | | Isoforms | | Variants | | PTMs |
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2015-01-01 | | protein level | | | | | | | 1 |
| 155 |
| 4 |
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2014-09-19 | | protein level | | | | | | | 1 |
| 109 |
| 4 |
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2014-05-27 | | protein level | | | | | | | 1 |
| 109 |
| 4 |
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2014-02-25 | | protein level | | | | | | | 1 |
| 109 |
| 4 |
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2013-12-09 | | protein level | | | | | | | 1 |
| 94 |
| 4 |
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2013-11-01 | | protein level | | | | | | | 1 |
| 88 |
| 4 |
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2013-09-12 | | protein level | | | | | | | 1 |
| 88 |
| 4 |
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2013-08-17 | | protein level | | | | | | | 1 |
| 88 |
| 4 |
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2013-07-15 | | protein level | | | | | | | 1 |
| 63 |
| 4 |
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2013-06-11 | | protein level | | | | | | | 1 |
| 63 |
| 4 |
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2013-02-12 | | transcript level | | | | | | | 1 |
| 20 |
| 4 |
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2012-12-20 | | transcript level | | | | | | | 1 |
| 20 |
| 4 |
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2012-10-30 | | transcript level | | | | | | | 1 |
| 23 |
| 4 |
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2012-10-07 | | transcript level | | | | | | | 1 |
| 23 |
| 4 |
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2012-08-24 | | transcript level | | | | | | | 1 |
| 21 |
| 4 |
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2012-07-28 | | transcript level | | | | | | | 1 |
| 21 |
| 4 |
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2012-06-08 | | transcript level | | | | | | | 1 |
| 26 |
| 4 |
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2012-05-07 | | transcript level | | | | | | | 1 |
| 23 |
| 4 |
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2012-04-10 | | transcript level | | | | | | | 1 |
| 23 |
| 4 |
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2012-01-13 | | transcript level | | | | | | | 1 |
| 16 |
| 4 |
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2011-12-20 | | transcript level | | | | | | | 1 |
| 16 |
| 4 |
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2011-11-11 | | transcript level | | | | | | | 1 |
| 16 |
| 4 |
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2011-08-23 | | transcript level | | | | | | | 1 |
| 16 |
| 4 |
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Protein Isoforms |
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| : Uniquely mapped peptide | | : Gene-specific peptide | | : Shared peptide |
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EST expression level of Protein Coding Gene (ref. NCBI UniGene EST) |
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Body Sites | |
Tissues | TPM* | |
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brain | 15 | |
eye | 9 | |
vascular | 19 | |
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Health State | |
Tissues | TPM* | |
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normal | 4 | |
germ cell tumor | 7 | |
glioma | 18 | |
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Developmental Stage | |
Tissues | TPM* | |
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fetus | 7 | |
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TPM*: Transcripts per million; transcript expression level measured by expression sequence tags. |
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Expression level of Protein (ref. Human Protein Atlas) |
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RNA-Seq. | |
Tissues | FPKM | |
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adipose tissue | 4.2 | |
cerebral cortex | 14.9 | |
esophagus | 1 | |
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Cancer | |
Tumor | Number of patients and Staining levels | |
breast cancer | |
carcinoid | |
cervical cancer | |
colorectal cancer | |
endometrial cancer | |
glioma | |
head and neck cancer | |
liver cancer | |
lung cancer | |
lymphoma | |
melanoma | |
ovarian cancer | |
pancreatic cancer | |
prostate cancer | |
renal cancer | |
skin cancer | |
stomach cancer | |
testis cancer | |
thyroid cancer | |
urothelial cancer | |
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RNA-seq colour codes |
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Highly expressed RNAs (FPKM >50) |
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Moderately expressed RNAs (50> FPKM >10) |
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Lower expressed RNAs (10> FPKM >1) |
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The lowest expressed RNAs (FPKM value of 0 or 1) |
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Staining level colour codes |
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Highly expressed protein |
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Moderately expressed protein |
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Lower expressed protein |
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Not Detected |
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Disease |
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No. | Disease Description | Ref. |
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1 | (*605807, gene) Cadherin 20; CDH20 | OMIM |
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