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> Protein (NX_Q9NUP1)
Protein (NX_Q9NUP1)
Protein
Gene SymbolBLOC1S4 to neXtProt (NX_Q9NUP1)
DescriptionBiogenesis of lysosome-related organelles complex 1 subunit 4
Chromosome4
Location4p16.1 (6717842 ~ 6719387) to Ensembl
Sequene Features : Isoforms 1, Variants 4, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.platelet aggregation
.membrane organization
.neuromuscular process controlling balance
  + 5 more...
.N/A .BLOC-1 complex
.cytosol
.cytoplasm
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 4 0
2014-09-19protein level
1 7 0
2014-05-27protein level
1 7 0
2014-02-25protein level
1 7 0
2013-12-09protein level
1 6 0
2013-11-01protein level
1 6 0
2013-09-12protein level
1 6 0
2013-08-17protein level
1 6 0
2013-07-15protein level
1 6 0
2013-06-11protein level
1 6 0
2013-02-12protein level
1 3 0
2012-12-20protein level
1 3 0
2012-10-30protein level
1 4 0
2012-10-07protein level
1 4 0
2012-08-24protein level
1 4 0
2012-07-28protein level
1 4 0
2012-06-08protein level
1 5 0
2012-05-07protein level
1 5 0
2012-04-10protein level
1 5 0
2012-01-13protein level
1 2 0
2011-12-20protein level
1 2 0
2011-11-11protein level
1 2 0
2011-08-23protein level
1 2 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9NUP1-1
8 0 0 23336.3988
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-465852,EBI-465781 BLOC1S6  
  .membrane fusion
.membrane organization
.positive regulation of pigment cell differentiation
  + 12 more...
.actin filament binding
.protein homodimerization activity
.identical protein binding
.syntaxin binding
.BLOC-1 complex
.transport vesicle
.extrinsic component of membrane
  + 4 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
ascites25
blood16
bone55
brain9
connective tissue13
embryonic tissue46
eye9
intestine8
kidney33
lung5
lymph22
lymph node77
ovary29
pancreas23
parathyroid97
placenta88
prostate10
salivary gland49
skin37
stomach20
testis16
thymus12
tonsil58
uterus17
Health State
TissuesTPM*
normal16
chondrosarcoma48
colorectal tumor8
gastrointestinal tumor75
germ cell tumor37
glioma9
head and neck tumor7
kidney tumor14
lung tumor19
lymphoma27
ovarian tumor13
pancreatic tumor28
primitive neuroectodermal tumor of the CNS31
prostate cancer19
skin tumor63
soft tissue/muscle tissue tumor23
uterine tumor22
Developmental Stage
TissuesTPM*
adult23
embryoid body42
blastocyst32
fetus7
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue5.2
adrenal gland6.3
appendix7
bone marrow5.8
cerebral cortex3.6
colon7.6
duodenum6.7
esophagus5.6
gallbladder7.2
heart muscle3.8
kidney7.1
liver2.9
lung5.6
lymph node10.7
ovary10.1
pancreas2.4
placenta8.3
prostate7.7
salivary gland4.9
skin4.8
small intestine6.3
spleen7.8
stomach7.4
testis4.5
thyroid gland5.2
urinary bladder8.1
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*605695, gene) Cappuccino, mouse, homolog of; CNOOMIM


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