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> Protein (NX_Q9NUQ9)
Protein (NX_Q9NUQ9)
Protein
Gene SymbolFAM49B to neXtProt (NX_Q9NUQ9)
DescriptionProtein FAM49B
Chromosome8
Location8q24.21 (130851839 ~ 131029375) to Ensembl
Sequene Features : Isoforms 2, Variants 33, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .extracellular exosome
.cilium
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 33 4
2014-09-19protein level
1 24 4
2014-05-27protein level
1 24 4
2014-02-25protein level
1 24 4
2013-12-09protein level
1 23 4
2013-11-01protein level
1 21 3
2013-09-12protein level
1 21 3
2013-08-17protein level
1 21 3
2013-07-15protein level
1 7 2
2013-06-11protein level
1 7 2
2013-02-12protein level
1 2 2
2012-12-20protein level
1 2 2
2012-10-30protein level
1 2 2
2012-10-07protein level
1 2 2
2012-08-24protein level
1 1 2
2012-07-28protein level
1 1 2
2012-06-08protein level
1 1 2
2012-05-07protein level
1 4 2
2012-04-10protein level
1 4 2
2012-01-13protein level
1 4 2
2011-12-20protein level
1 4 2
2011-11-11protein level
1 4 2
2011-08-23protein level
1 4 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9NUQ9-1
7 8 2 36724.5436
NX_Q9NUQ9-2
0 8 2 20180.0323
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-1055930,EBI-740897 NIF3L1  
  .negative regulation of nucleic acid-templated transcription
.positive regulation of transcription, DNA-templated
.neuron differentiation
.identical protein binding
.transcription factor binding
.mitochondrion
.cytoplasm
.nucleus
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland91
ascites150
bladder234
blood163
bone69
bone marrow328
brain145
cervix61
connective tissue114
ear62
embryonic tissue65
esophagus148
eye38
heart67
intestine73
kidney66
larynx42
liver38
lung86
lymph67
lymph node77
mammary gland39
mouth75
muscle28
ovary137
pancreas84
parathyroid97
pharynx98
placenta113
prostate73
salivary gland296
skin52
spleen112
stomach94
testis71
thymus100
thyroid128
trachea154
uterus68
vascular19
Health State
TissuesTPM*
normal94
bladder carcinoma284
breast (mammary gland) tumor64
cervical tumor86
chondrosarcoma60
colorectal tumor79
esophageal tumor173
gastrointestinal tumor109
germ cell tumor102
glioma93
head and neck tumor67
kidney tumor58
leukemia148
liver tumor20
lung tumor48
lymphoma83
non-neoplasia165
ovarian tumor157
pancreatic tumor76
primitive neuroectodermal tumor of the CNS141
prostate cancer96
retinoblastoma43
skin tumor71
soft tissue/muscle tissue tumor71
uterine tumor22
Developmental Stage
TissuesTPM*
adult77
embryoid body85
blastocyst65
neonate32
fetus77
infant170
juvenile125
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue38.9
adrenal gland31.3
appendix113.6
bone marrow123.7
cerebral cortex56.1
colon33.1
duodenum32.1
esophagus33.6
gallbladder37.5
heart muscle16.3
kidney21.1
liver12.3
lung37.4
lymph node122.5
ovary12.4
pancreas8.9
placenta41
prostate15.6
salivary gland14.7
skin18.4
small intestine43.1
spleen80.3
stomach32.6
testis35.1
thyroid gland32.5
urinary bladder55.6
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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