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> Protein (NX_Q9NY84)
Protein (NX_Q9NY84)
Protein
Gene SymbolVNN3 to neXtProt (NX_Q9NY84)
DescriptionVascular non-inflammatory molecule 3
Chromosome6
Location6q23.2 (133043926 ~ 133055904) to Ensembl
Sequene Features : Isoforms 8, Variants 34, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.nitrogen compound metabolic process .pantetheine hydrolase activity .anchored component of membrane
.plasma membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
8 34 5
2014-09-19transcript level
8 28 5
2014-05-27transcript level
8 27 5
2014-02-25transcript level
8 27 5
2013-12-09transcript level
8 19 5
2013-11-01transcript level
8 19 5
2013-09-12transcript level
8 19 5
2013-08-17transcript level
8 19 5
2013-07-15transcript level
8 19 5
2013-06-11transcript level
8 19 5
2013-02-12transcript level
8 15 14
2012-12-20transcript level
8 21 14
2012-10-30transcript level
8 20 14
2012-10-07transcript level
8 20 5
2012-08-24transcript level
8 17 5
2012-07-28transcript level
8 16 5
2012-06-08transcript level
8 4 5
2012-05-07transcript level
8 4 5
2012-04-10transcript level
8 4 5
2012-01-13transcript level
8 4 5
2011-12-20transcript level
8 8 5
2011-11-11transcript level
8 8 5
2011-08-23transcript level
8 8 5
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9NY84-1
11 10 1 56081.8496
NX_Q9NY84-2
2 10 1 30699.4149
NX_Q9NY84-3
0 5 0 13102.8349
NX_Q9NY84-4
1 5 0 16750.5395
NX_Q9NY84-5
2 8 1 23194.6649
NX_Q9NY84-6
1 5 0 14903.905
NX_Q9NY84-7
0 5 0 14471.5822
NX_Q9NY84-8
3 4 0 18189.3657
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
blood89
connective tissue26
esophagus49
liver19
pharynx24
placenta17
spleen18
trachea251
uterus4
Health State
TissuesTPM*
normal8
esophageal tumor57
liver tumor41
soft tissue/muscle tissue tumor31
uterine tumor11
Developmental Stage
TissuesTPM*
adult5
fetus14
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue2.1
appendix5.3
bone marrow30.1
gallbladder2.7
liver27.6
lung2.2
placenta3.9
spleen6.1
urinary bladder2
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*606592, gene) Vanin 3; VNN3OMIM


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