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> Protein (NX_Q9UBN4)
Protein (NX_Q9UBN4)
Protein
Gene SymbolTRPC4 to neXtProt (NX_Q9UBN4)
DescriptionShort transient receptor potential channel 4
Chromosome13
Location13q13.3 (38210773 ~ 38444562) to Ensembl
Sequene Features : Isoforms 7, Variants 213, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.calcium ion transmembrane transport
.calcium ion import
.transmembrane transport
  + 7 more...
.inositol 1,4,5 trisphosphate binding
.cadherin binding
.store-operated calcium channel activity
.beta-catenin binding
.calcium channel complex
.cortical cytoskeleton
.basolateral plasma membrane
  + 4 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
7 213 2
2014-09-19protein level
7 155 2
2014-05-27protein level
7 151 2
2014-02-25protein level
7 144 2
2013-12-09protein level
7 135 2
2013-11-01protein level
7 128 2
2013-09-12protein level
7 128 2
2013-08-17protein level
6 128 2
2013-07-15protein level
6 69 2
2013-06-11protein level
6 69 2
2013-02-12protein level
6 28 22
2012-12-20protein level
6 28 22
2012-10-30protein level
6 30 22
2012-10-07protein level
6 30 4
2012-08-24protein level
6 13 4
2012-07-28protein level
6 12 4
2012-06-08protein level
6 15 4
2012-05-07protein level
6 15 4
2012-04-10protein level
6 15 4
2012-01-13protein level
6 14 4
2011-12-20protein level
6 14 4
2011-11-11protein level
6 14 4
2011-08-23protein level
6 14 4
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9UBN4-1
0 44 1 112029.8802
NX_Q9UBN4-2
0 39 1 102574.9278
NX_Q9UBN4-3
0 34 1 96326.9296
NX_Q9UBN4-4
1 35 1 94798.915
NX_Q9UBN4-5
1 43 1 112651.2129
NX_Q9UBN4-6
1 35 1 92162.6604
NX_Q9UBN4-7
1 14 0 36736.0398
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-929504,EBI-929476 MX1  
  .type I interferon signaling pathway
.defense response to virus
.innate immune response
  + 7 more...
.GTP binding
.GTPase activity
.perinuclear region of cytoplasm
.nuclear membrane
.cytosol
  + 2 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain10
connective tissue20
embryonic tissue18
kidney4
lung2
placenta3
trachea19
uterus68
Health State
TissuesTPM*
normal8
lung tumor9
soft tissue/muscle tissue tumor23
Developmental Stage
TissuesTPM*
adult4
blastocyst48
fetus14
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
appendix1
cerebral cortex1.3
gallbladder4.5
heart muscle1
ovary3.1
pancreas1.2
placenta1.6
prostate5.8
stomach1.4
urinary bladder2
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Disease
No.Disease DescriptionRef.
1(*603651, gene) Transient receptor potential cation channel, subfamily c, member 4;OMIM


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