Home| Contact Us

HOME SEARCH STATISTICS
> Protein (NX_Q9Y2L5)
Protein (NX_Q9Y2L5)
Protein
Gene SymbolTRAPPC8 to neXtProt (NX_Q9Y2L5)
DescriptionTrafficking protein particle complex subunit 8
Chromosome18
Location18q12.1 (29409136 ~ 29533099) to Ensembl
Sequene Features : Isoforms 2, Variants 149, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.nucleophagy
.protein localization to pre-autophagosomal structure
.CVT pathway
  + 3 more...
.N/A .TRAPPIII protein complex
.cytoplasmic vesicle
.pre-autophagosomal structure
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 149 4
2014-09-19protein level
2 122 4
2014-05-27protein level
2 122 4
2014-02-25protein level
2 122 4
2013-12-09protein level
2 100 4
2013-11-01protein level
2 94 3
2013-09-12protein level
2 94 3
2013-08-17protein level
2 94 3
2013-07-15protein level
2 68 3
2013-06-11protein level
2 68 3
2013-02-12protein level
2 39 4
2012-12-20protein level
2 38 4
2012-10-30protein level
2 43 4
2012-10-07protein level
2 43 2
2012-08-24protein level
2 34 2
2012-07-28protein level
2 34 2
2012-06-08protein level
2 12 2
2012-05-07protein level
2 12 2
2012-04-10protein level
2 12 2
2012-01-13protein level
2 12 2
2011-12-20protein level
2 12 2
2011-11-11protein level
2 12 2
2011-08-23protein level
2 12 2
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9Y2L5-1
4 68 0 160895.3966
NX_Q9Y2L5-2
2 68 0 152933.3709
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-2820056,EBI-2857298 TRAPPC13  
  .N/A .N/A .N/A
2 EBI-2820056,EBI-743566 TRAPPC3  
  .vesicle-mediated transport .N/A .Golgi apparatus
.endoplasmic reticulum
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
bladder167
bone41
bone marrow41
brain27
cervix82
connective tissue53
ear62
embryonic tissue32
eye23
heart11
intestine34
kidney61
larynx42
liver19
lung8
lymph node55
mammary gland33
mouth60
muscle28
nerve257
ovary19
pancreas28
parathyroid48
pharynx24
placenta28
prostate42
skin33
testis68
thymus62
thyroid21
trachea19
uterus43
vascular38
Health State
TissuesTPM*
normal38
bladder carcinoma113
breast (mammary gland) tumor21
chondrosarcoma24
colorectal tumor53
gastrointestinal tumor16
germ cell tumor11
glioma46
head and neck tumor44
kidney tumor43
leukemia21
lung tumor9
non-neoplasia20
ovarian tumor13
prostate cancer57
retinoblastoma21
skin tumor7
soft tissue/muscle tissue tumor39
uterine tumor55
Developmental Stage
TissuesTPM*
adult44
embryoid body57
blastocyst48
fetus23
juvenile35
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue14.4
adrenal gland18.4
appendix20.2
bone marrow11.2
cerebral cortex15.6
colon17.6
duodenum17.1
esophagus20.6
gallbladder16.1
heart muscle13.7
kidney18.8
liver17.9
lung16
lymph node25.9
ovary13.3
pancreas7.1
placenta15.4
prostate16.7
salivary gland11.7
skin21.9
small intestine18.6
spleen18.5
stomach15
testis50.2
thyroid gland22.3
urinary bladder20.4
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*614136, gene) Trafficking protein particle complex, subunit 8; TRAPPC8OMIM


#424, YPRC/BPRC, Industry-University Research Center, Yonsei Univ., Seodaemun-gu, Seoul, Korea, 120-749
Tel: +82-2-2123-6626, Fax: +82-2-393-6589
2014-2019 (C) Yonsei Proteome Research Center