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> Protein (NX_Q9Y2Y9)
Protein (NX_Q9Y2Y9)
Protein
Gene SymbolKLF13 to neXtProt (NX_Q9Y2Y9)
DescriptionKrueppel-like factor 13
Chromosome15
Location15q13.3 (31619058 ~ 31727868) to Ensembl
Sequene Features : Isoforms 1, Variants 11, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.positive regulation of transcription from RNA polymerase II promoter
.negative regulation of erythrocyte differentiation
.negative regulation of cell proliferation
.transcription from RNA polymerase II promoter
.metal ion binding
.DNA binding
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 11 2
2014-09-19protein level
1 7 2
2014-05-27protein level
1 7 2
2014-02-25protein level
1 7 2
2013-12-09protein level
1 6 2
2013-11-01protein level
1 6 2
2013-09-12protein level
1 6 2
2013-08-17protein level
1 6 2
2013-07-15protein level
1 3 2
2013-06-11protein level
1 3 2
2013-02-12protein level
1 1 0
2012-12-20protein level
1 1 0
2012-10-30protein level
1 1 0
2012-10-07protein level
1 1 0
2012-08-24protein level
1 1 0
2012-07-28protein level
1 1 0
2012-06-08protein level
1 3 0
2012-05-07protein level
1 6 0
2012-04-10protein level
1 6 0
2012-01-13protein level
1 5 0
2011-12-20protein level
1 5 0
2011-11-11protein level
1 5 0
2011-08-23protein level
1 5 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9Y2Y9-1
13 0 0 31160.4236
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-1255893,EBI-7049352 GATA4  
  .regulation of cardiac muscle cell contraction
.seminiferous tubule development
.epithelial cell fate commitment
  + 48 more...
.co-SMAD binding
.transcription regulatory region DNA binding
.sequence-specific DNA binding
  + 10 more...
.RNA polymerase II transcription factor complex
.nucleoplasm
.nucleus
.nuclear chromatin
2 EBI-1255893,EBI-395940 PRPF4B  
  .RNA splicing
.protein phosphorylation
.mRNA splicing, via spliceosome
.poly(A) RNA binding
.ATP binding
.protein serine/threonine kinase activity
.protein kinase activity
.catalytic step 2 spliceosome
.chromosome
.nucleoplasm
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
bladder100
blood40
bone41
bone marrow61
brain32
connective tissue40
embryonic tissue32
eye4
heart67
intestine60
kidney52
liver14
lung56
lymph158
lymph node200
mammary gland46
mouth60
muscle37
nerve64
pancreas51
parathyroid145
placenta7
prostate10
skin47
spleen18
stomach209
testis4
thymus75
uterus38
vascular38
Health State
TissuesTPM*
normal26
bladder carcinoma284
breast (mammary gland) tumor32
chondrosarcoma72
colorectal tumor88
gastrointestinal tumor84
germ cell tumor34
glioma130
head and neck tumor29
kidney tumor43
leukemia222
liver tumor20
lung tumor97
lymphoma96
pancreatic tumor38
primitive neuroectodermal tumor of the CNS47
prostate cancer19
skin tumor7
soft tissue/muscle tissue tumor55
uterine tumor44
Developmental Stage
TissuesTPM*
adult30
embryoid body28
blastocyst48
fetus37
infant42
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue37.6
adrenal gland20.9
appendix27.4
bone marrow57.7
cerebral cortex26.8
colon34.4
duodenum20.7
esophagus22.8
gallbladder17.4
heart muscle23.8
kidney27
liver5
lung38.2
lymph node38.5
ovary12.3
pancreas31.1
placenta9.5
prostate13.2
salivary gland10.2
skin35.5
small intestine26.7
spleen33.3
stomach18.9
testis10.5
thyroid gland30.9
urinary bladder20.9
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Disease
No.Disease DescriptionRef.
1(*605328, gene) Kruppel-like factor 13; KLF13OMIM


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