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> Protein (NX_Q9Y3D5)
Protein (NX_Q9Y3D5)
Protein
Gene SymbolMRPS18C to neXtProt (NX_Q9Y3D5)
Description28S ribosomal protein S18c, mitochondrial
Chromosome4
Location4q21.23 (84377085 ~ 84390888) to Ensembl
Sequene Features : Isoforms 1, Variants 16, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.mitochondrial translational termination
.mitochondrial translational elongation
.mitochondrial translational initiation
  + 3 more...
.structural constituent of ribosome .cytosolic small ribosomal subunit
.mitochondrial small ribosomal subunit
.mitochondrial inner membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 16 1
2014-09-19protein level
1 11 1
2014-05-27protein level
1 11 1
2014-02-25protein level
1 11 1
2013-12-09protein level
1 11 1
2013-11-01protein level
1 11 0
2013-09-12protein level
1 11 0
2013-08-17protein level
1 11 0
2013-07-15protein level
1 5 0
2013-06-11protein level
1 5 0
2013-02-12protein level
1 2 1
2012-12-20protein level
1 2 1
2012-10-30protein level
1 1 1
2012-10-07protein level
1 1 1
2012-08-24protein level
1 1 1
2012-07-28protein level
1 1 1
2012-06-08protein level
1 1 1
2012-05-07protein level
1 1 1
2012-04-10protein level
1 1 1
2012-01-13protein level
1 1 1
2011-12-20protein level
1 1 1
2011-11-11protein level
1 1 1
2011-08-23protein level
1 1 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9Y3D5-1
6 0 0 15839.2368
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland30
ascites25
blood32
bone13
bone marrow82
brain23
embryonic tissue37
eye14
heart55
intestine17
kidney42
liver38
lung8
lymph node22
mammary gland6
mouth45
muscle65
ovary9
pancreas18
parathyroid145
placenta24
prostate68
salivary gland49
skin4
stomach20
testis9
thymus12
thyroid21
trachea19
umbilical cord72
uterus8
vascular96
Health State
TissuesTPM*
normal35
adrenal tumor158
bladder carcinoma56
breast (mammary gland) tumor10
chondrosarcoma48
colorectal tumor8
gastrointestinal tumor8
germ cell tumor30
glioma27
head and neck tumor7
kidney tumor14
leukemia10
lung tumor9
lymphoma69
non-neoplasia10
ovarian tumor13
prostate cancer96
retinoblastoma21
soft tissue/muscle tissue tumor7
uterine tumor11
Developmental Stage
TissuesTPM*
adult19
embryoid body57
blastocyst16
neonate32
fetus48
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue11.8
adrenal gland14.5
appendix13.7
bone marrow8.1
cerebral cortex9.4
colon13.1
duodenum10.3
esophagus12
gallbladder7.1
heart muscle8.5
kidney15.8
liver9.4
lung12.3
lymph node10.4
ovary10.1
pancreas4
placenta8.5
prostate9
salivary gland6.8
skin9.4
small intestine11.5
spleen9.4
stomach9.7
testis8.7
thyroid gland7.1
urinary bladder7.2
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*611983, gene) Mitochondrial ribosomal protein s18c; MRPS18COMIM


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