Home| Contact Us

HOME SEARCH STATISTICS
> Protein (NX_Q9Y3E7)
Protein (NX_Q9Y3E7)
Protein
Gene SymbolCHMP3 to neXtProt (NX_Q9Y3E7)
DescriptionCharged multivesicular body protein 3
Chromosome2
Location2p11.2 (86730554 ~ 86948245) to Ensembl
Sequene Features : Isoforms 4, Variants 4, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.positive regulation of viral release from host cell
.negative regulation of viral release from host cell
.membrane organization
  + 13 more...
.ubiquitin-specific protease binding
.protein homodimerization activity
.phosphatidylcholine binding
.extracellular exosome
.late endosome membrane
.cytoplasmic membrane-bounded vesicle
  + 3 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
4 4 3
2014-09-19protein level
4 16 3
2014-05-27protein level
4 16 3
2014-02-25protein level
4 16 3
2013-12-09protein level
4 14 3
2013-11-01protein level
4 14 3
2013-09-12protein level
4 14 3
2013-08-17protein level
4 14 3
2013-07-15protein level
4 11 5
2013-06-11protein level
4 11 5
2013-02-12protein level
4 5 18
2012-12-20protein level
4 5 18
2012-10-30protein level
4 6 18
2012-10-07protein level
4 6 5
2012-08-24protein level
4 3 5
2012-07-28protein level
4 3 5
2012-06-08protein level
4 20 5
2012-05-07protein level
4 20 5
2012-04-10protein level
4 20 5
2012-01-13protein level
4 19 5
2011-12-20protein level
4 19 5
2011-11-11protein level
2 13 5
2011-08-23protein level
2 13 5
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9Y3E7-1
0 7 0 25056.6993
NX_Q9Y3E7-2
0 5 0 17314.4684
NX_Q9Y3E7-3
2 6 1 28368.0523
NX_Q9Y3E7-4
0 6 0 20756.4076
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-2118119,EBI-396676 STAMBP  
  .negative regulation of Ras protein signal transduction
.negative regulation of neuron apoptotic process
.protein deubiquitination
  + 4 more...
.metal ion binding
.protein domain specific binding
.metallopeptidase activity
.ubiquitin-specific protease activity
.extracellular exosome
.cleavage furrow
.plasma membrane
  + 4 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland151
ascites50
bladder234
blood114
bone83
brain114
cervix185
connective tissue181
ear62
embryonic tissue89
esophagus99
eye81
heart134
intestine133
kidney104
larynx170
liver92
lung110
lymph67
lymph node44
mammary gland191
mouth105
muscle169
nerve257
ovary118
pancreas98
parathyroid97
pharynx73
placenta113
prostate121
salivary gland148
skin128
spleen112
stomach73
testis85
thymus100
thyroid107
trachea115
umbilical cord145
uterus163
vascular251
Health State
TissuesTPM*
normal97
adrenal tumor158
bladder carcinoma56
breast (mammary gland) tumor193
cervical tumor260
chondrosarcoma60
colorectal tumor97
esophageal tumor57
gastrointestinal tumor59
germ cell tumor75
glioma65
head and neck tumor97
kidney tumor130
leukemia105
liver tumor156
lung tumor68
lymphoma55
non-neoplasia196
ovarian tumor118
pancreatic tumor104
primitive neuroectodermal tumor of the CNS94
prostate cancer48
retinoblastoma129
skin tumor119
soft tissue/muscle tissue tumor143
uterine tumor177
Developmental Stage
TissuesTPM*
adult102
embryoid body100
blastocyst48
neonate128
fetus66
infant127
juvenile107
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue64.3
adrenal gland63.1
appendix55.1
bone marrow33
cerebral cortex61.2
colon91.6
duodenum70.2
esophagus94.3
gallbladder76.9
heart muscle101.1
kidney65.3
liver18.8
lung69
lymph node45.4
ovary61.2
pancreas42.4
placenta45.2
prostate74.6
salivary gland46.4
skin48.8
small intestine72.1
spleen48.3
stomach71.1
testis64.7
thyroid gland93.5
urinary bladder98.7
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*610052, gene) Vacuolar protein sorting 24, yeast, homolog of; VPS24OMIM


#424, YPRC/BPRC, Industry-University Research Center, Yonsei Univ., Seodaemun-gu, Seoul, Korea, 120-749
Tel: +82-2-2123-6626, Fax: +82-2-393-6589
2014-2019 (C) Yonsei Proteome Research Center