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> Protein (NX_Q9Y3P9)
Protein (NX_Q9Y3P9)
Protein
Gene SymbolRABGAP1 to neXtProt (NX_Q9Y3P9)
DescriptionRab GTPase-activating protein 1
Chromosome9
Location9q33.2 (125703112 ~ 125867145) to Ensembl
Sequene Features : Isoforms 4, Variants 95, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.positive regulation of GTPase activity
.cell cycle
.Rab GTPase binding
.tubulin binding
.GTPase activator activity
.DNA binding
.microtubule associated complex
.cytosol
.centrosome
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
4 95 2
2014-09-19protein level
4 65 2
2014-05-27protein level
4 65 2
2014-02-25protein level
4 64 2
2013-12-09protein level
4 52 2
2013-11-01protein level
4 49 2
2013-09-12protein level
4 49 2
2013-08-17protein level
4 49 2
2013-07-15protein level
4 37 2
2013-06-11protein level
4 37 2
2013-02-12protein level
4 20 4
2012-12-20protein level
4 20 4
2012-10-30protein level
4 24 4
2012-10-07protein level
4 24 2
2012-08-24protein level
4 21 2
2012-07-28protein level
4 20 2
2012-06-08protein level
4 21 2
2012-05-07protein level
4 13 2
2012-04-10protein level
4 13 2
2012-01-13protein level
4 8 2
2011-12-20protein level
4 8 2
2011-11-11protein level
4 8 1
2011-08-23protein level
4 8 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9Y3P9-1
17 29 3 121660.0752
NX_Q9Y3P9-2
3 25 1 67055.8706
NX_Q9Y3P9-3
1 20 0 53161.5947
NX_Q9Y3P9-4
1 9 0 28693.9962
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-1057545,EBI-746969 GABARAPL1  
  .membrane fusion
.nucleophagy
.mitochondrion degradation
.autophagic vacuole assembly
.GABA receptor binding
.beta-tubulin binding
.Tat protein binding
.microtubule binding
.cell body
.dendrite cytoplasm
.dendrite membrane
  + 10 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue155
adrenal gland60
ascites50
blood32
bone55
bone marrow20
brain25
cervix20
connective tissue33
ear124
embryonic tissue75
eye33
heart78
intestine21
kidney23
larynx42
liver29
lung35
lymph node66
mammary gland33
mouth30
muscle37
nerve128
ovary9
pancreas37
pharynx73
placenta24
prostate52
skin52
stomach41
testis20
thymus25
thyroid21
trachea19
uterus81
Health State
TissuesTPM*
normal41
adrenal tumor79
breast (mammary gland) tumor32
cervical tumor28
chondrosarcoma36
colorectal tumor35
gastrointestinal tumor33
germ cell tumor41
glioma18
head and neck tumor37
liver tumor20
lung tumor19
lymphoma27
non-neoplasia51
ovarian tumor13
pancreatic tumor19
primitive neuroectodermal tumor of the CNS23
prostate cancer38
skin tumor39
soft tissue/muscle tissue tumor31
uterine tumor110
Developmental Stage
TissuesTPM*
adult42
embryoid body71
blastocyst48
neonate96
fetus44
infant42
juvenile71
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue24.5
adrenal gland19.2
appendix22.3
bone marrow5.2
cerebral cortex37.2
colon24.2
duodenum13.7
esophagus36.2
gallbladder25.8
heart muscle23.9
kidney21.7
liver8.8
lung22.1
lymph node25.2
ovary28.3
pancreas9.1
placenta25.6
prostate32.8
salivary gland20.1
skin23.2
small intestine13.3
spleen21.8
stomach18.4
testis31.2
thyroid gland47.4
urinary bladder31.3
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)


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