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> Protein (NX_Q9Y5B0)
Protein (NX_Q9Y5B0)
Protein
Gene SymbolCTDP1 to neXtProt (NX_Q9Y5B0)
DescriptionRNA polymerase II subunit A C-terminal domain phosphatase
Chromosome18
Location18q23 (77439801 ~ 77514510) to Ensembl
Sequene Features : Isoforms 2, Variants 102, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.cell division
.positive regulation of viral transcription
.viral process
  + 5 more...
.CTD phosphatase activity
.DNA-directed RNA polymerase activity
.spindle midzone
.midbody
.actin cytoskeleton
  + 5 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 102 8
2014-09-19protein level
2 78 8
2014-05-27protein level
2 78 8
2014-02-25protein level
4 78 8
2013-12-09protein level
4 62 8
2013-11-01protein level
4 62 8
2013-09-12protein level
4 62 6
2013-08-17protein level
4 62 6
2013-07-15protein level
4 46 5
2013-06-11protein level
4 46 5
2013-02-12protein level
4 27 16
2012-12-20protein level
4 26 16
2012-10-30protein level
4 31 16
2012-10-07protein level
4 31 5
2012-08-24protein level
4 29 5
2012-07-28protein level
4 29 5
2012-06-08protein level
4 40 5
2012-05-07protein level
4 36 5
2012-04-10protein level
4 36 5
2012-01-13protein level
4 30 5
2011-12-20protein level
4 30 5
2011-11-11protein level
4 30 5
2011-08-23protein level
4 30 5
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9Y5B0-1
9 43 0 104334.3486
NX_Q9Y5B0-4
4 43 0 93426.6374
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
ascites25
blood65
bone13
brain10
connective tissue26
embryonic tissue23
eye33
heart11
intestine34
kidney14
liver4
lung53
lymph112
lymph node22
mammary gland39
muscle9
ovary19
pancreas56
placenta21
prostate5
skin14
spleen37
stomach10
testis6
thyroid21
uterus34
vascular19
Health State
TissuesTPM*
normal18
breast (mammary gland) tumor53
chondrosarcoma132
colorectal tumor35
gastrointestinal tumor8
germ cell tumor26
glioma9
head and neck tumor7
leukemia95
liver tumor10
lung tumor58
lymphoma69
non-neoplasia31
pancreatic tumor19
primitive neuroectodermal tumor of the CNS23
prostate cancer9
retinoblastoma43
skin tumor23
soft tissue/muscle tissue tumor15
uterine tumor22
Developmental Stage
TissuesTPM*
adult22
blastocyst16
fetus14
juvenile53
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue5.6
adrenal gland3.7
appendix7.9
bone marrow8.5
cerebral cortex3.9
colon8.4
duodenum5.9
esophagus4.4
gallbladder4.7
heart muscle2.7
kidney6.6
liver2.9
lung5.9
lymph node8.5
ovary2.3
pancreas3.5
placenta5
prostate6
salivary gland3.8
skin8.6
small intestine6.6
spleen9.7
stomach7.3
testis14.7
thyroid gland4.8
urinary bladder5.8
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(#604168, phenotype) Congenital cataracts, facial dysmorphism, and neuropathyOMIM
2(*604927, gene) C-terminal domain of rna polymerase ii subunit a, phosphatase of,OMIM


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