Home| Contact Us

HOME SEARCH STATISTICS
> Protein (NX_Q9Y5E9)
Protein (NX_Q9Y5E9)
Protein
Gene SymbolPCDHB14 to neXtProt (NX_Q9Y5E9)
DescriptionProtocadherin beta-14
Chromosome5
Location5q31.3 (140602931 ~ 140605858) to Ensembl
Sequene Features : Isoforms 2, Variants 170, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
.synapse assembly
.synaptic transmission
.homophilic cell adhesion via plasma membrane adhesion molecules
.calcium ion binding .integral component of membrane
.plasma membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 170 7
2014-09-19protein level
1 131 7
2014-05-27transcript level
1 131 7
2014-02-25transcript level
1 130 7
2013-12-09transcript level
1 113 7
2013-11-01transcript level
1 107 7
2013-09-12transcript level
1 107 7
2013-08-17transcript level
1 107 7
2013-07-15transcript level
1 68 7
2013-06-11transcript level
1 68 7
2013-02-12transcript level
1 39 7
2012-12-20transcript level
1 39 7
2012-10-30transcript level
1 37 7
2012-10-07transcript level
1 37 7
2012-08-24transcript level
1 33 7
2012-07-28transcript level
1 32 7
2012-06-08transcript level
1 32 7
2012-05-07transcript level
1 25 7
2012-04-10transcript level
1 25 7
2012-01-13transcript level
1 11 7
2011-12-20transcript level
1 11 7
2011-11-11transcript level
1 11 7
2011-08-23transcript level
1 11 7
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q9Y5E9-1
7 22 7 87493.5611
NX_Q9Y5E9-2
1 22 7 70404.6655
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-10329013,EBI-1050964 PSTPIP1  
  .innate immune response
.nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway
.signal transduction
  + 3 more...
.N/A .perinuclear region of cytoplasm
.cleavage furrow
.lamellipodium
  + 5 more...
2 EBI-10329013,EBI-8638511 RBMY1A1  
  .RNA splicing
.mRNA processing
.regulation of alternative mRNA splicing, via spliceosome
.mRNA binding
.nucleotide binding
.nucleus
3 EBI-10329013,EBI-304185 HNRNPK  
  .regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter
.positive regulation of receptor-mediated endocytosis
.positive regulation of transcription from RNA polymerase II promoter
  + 8 more...
.poly(A) RNA binding
.RNA binding
.single-stranded DNA binding
  + 2 more...
.catalytic step 2 spliceosome
.extracellular exosome
.cell projection
  + 7 more...
4 EBI-10329013,EBI-8642021 RBMY1F  
  .RNA splicing
.spermatogenesis
.mRNA processing
.RNA binding
.nucleotide binding
.nucleus
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue77
bone13
brain43
cervix41
connective tissue26
embryonic tissue14
eye4
kidney9
liver14
mammary gland6
mouth60
nerve64
pancreas9
prostate5
stomach10
testis6
thymus75
trachea19
uterus30
Health State
TissuesTPM*
normal16
cervical tumor57
gastrointestinal tumor8
germ cell tumor18
glioma27
head and neck tumor29
kidney tumor14
liver tumor10
non-neoplasia10
pancreatic tumor19
primitive neuroectodermal tumor of the CNS7
Developmental Stage
TissuesTPM*
adult6
blastocyst16
fetus52
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue2
adrenal gland2.2
cerebral cortex4.4
colon1.5
esophagus1.6
gallbladder2.8
heart muscle1.3
kidney1.6
lung1.6
ovary2.4
prostate2.5
salivary gland1.1
skin3.6
spleen1.1
stomach1.1
testis1.4
urinary bladder1.7
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(#604967, phenotype) Protocadherin-beta gene cluster; PCDHB@OMIM
2(*606340, gene) Protocadherin-beta 14; PCDHB14OMIM


#424, YPRC/BPRC, Industry-University Research Center, Yonsei Univ., Seodaemun-gu, Seoul, Korea, 120-749
Tel: +82-2-2123-6626, Fax: +82-2-393-6589
2014-2019 (C) Yonsei Proteome Research Center